Deshaking/Stabilizing Video in Ubuntu Precise 12.04

The easiest option is with transcode:
transcode -J stabilize -i MVI_1234.MOV && \
transcode -J transform -i MVI_1234.MOV -y xvid4 -o stable.mp4

But the version that comes with precise is not very good, so here's a backported version that works better:

There is a guide with a bit more detail here. And of course there's still the option of using Virtualdub with Wine.

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